Top cofit genes for mRNA_1635 from Rhodosporidium toruloides IFO0880

10003: K18748 SSD1 protein SSD1
SEED: 3'-to-5' exoribonuclease RNase R

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_4115	12483	BLAST Nuclear receptor corepressor 2 [Rhizoctonia solani]	no	0.81
2	mRNA_840	9208	BLAST protein of unknown function DUF1746, fungi [Rhodo...	no	0.81
3	mRNA_431	8799	HMMPfam-SH3-binding, glutamic acid-rich protein-PF04908,ProSiteProfiles-Glutaredoxin domain profile.-PS51354,SUPERFAMILY--SSF52833	no	0.80
4	mRNA_5655	14023	K01115 PLD1_2 phospholipase D1/2	no	0.80
5	mRNA_6126	14494	Hypothetical Protein	no	0.79
6	mRNA_925	9293	K10704 UBE2V ubiquitin-conjugating enzyme E2 variant	no	0.77
7	mRNA_2862	11230	PRINTS-Proline rich extensin signature-PR01217	no	0.77
8	mRNA_3829	12197	KOG0519 Sensory transduction histidine kinase	no	0.76
9	mRNA_6020	14388	SUPERFAMILY--SSF52047	no	0.76
10	mRNA_4828	13196	SUPERFAMILY--SSF52047	no	0.75
11	mRNA_8174	16542	K00645 fabD [acyl-carrier-protein] S-malonyltransferase	no	0.74
12	mRNA_221	8589	HMMPfam-Squalene/phytoene synthase-PF00494,ProSitePatterns-Squalene and phytoene synthases signature 2.-PS01045,SUPERFAMILY--SSF48576,TIGRFAM-CarR_dom_SF lycopene cyclase domain-TIGR03462	no	0.74
13	mRNA_3371	11739	K13806 DAGL sn1-specific diacylglycerol lipase	no	0.74
14	mRNA_382	8750	Hypothetical Protein	no	0.73
15	mRNA_3758	12126	HMMPfam-Glycosyl hydrolases family 15-PF00723,SUPERFAMILY--SSF48208	no	0.73
16	mRNA_3688	12056	KOG4285 Mitotic phosphoprotein	no	0.73
17	mRNA_7755	16123	Hypothetical Protein	no	0.72
18	mRNA_7197	15565	KOG0490 Transcription factor, contains HOX domain	no	0.72
19	mRNA_50	8418	KOG1611 Predicted short chain-type dehydrogenase	no	0.71
20	mRNA_3967	12335	KOG1972 Uncharacterized conserved protein	no	0.70