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Cofit
Protein
Homologs
Top cofit genes for mRNA_1653 from
Rhodosporidium toruloides IFO0880
10021
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_414
8782
KOG4170 2-enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/Peroxisomal 3-ketoacyl-CoA-thiolase, sterol-binding domain and related enzymes
no
0.79
2
mRNA
_1265
9633
K14861 URB1 nucleolar pre-ribosomal-associated protein 1
no
0.79
3
mRNA
_8091
16459
K15463 RIT1 tRNA A64-2'-O-ribosylphosphate transferase
no
0.78
4
mRNA
_7131
15499
K17800 LETM1, MDM38 LETM1 and EF-hand domain-containing protein 1, mitochondrial
no
0.77
5
mRNA
_6858
15226
SUPERFAMILY--SSF103473
no
0.76
6
mRNA
_2539
10907
Hypothetical Protein
no
0.76
7
mRNA
_6725
15093
K07575 K07575 PUA domain protein
no
0.76
8
mRNA
_5463
13831
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.75
9
mRNA
_1063
9431
BLAST DNA replication ATP-dependent helicase Dna2 [Rhod...
no
0.75
10
mRNA
_4434
12802
Hypothetical Protein
no
0.75
11
mRNA
_3537
11905
Hypothetical Protein
no
0.74
12
mRNA
_7688
16056
Hypothetical Protein
no
0.74
13
mRNA
_1777
10145
BLAST expressed protein [Cryptococcus neoformans var. neofo...
no
0.74
14
mRNA
_5866
14234
KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
no
0.74
15
mRNA
_5499
13867
KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.73
16
mRNA
_2432
10800
K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20
no
0.73
17
mRNA
_6729
15097
HMMPfam-Putative GTPase activating protein for Arf-PF01412,PRINTS-HIV Rev interacting protein signature-PR00405,ProSiteProfiles-ARF GTPase-activating proteins domain profile.-PS50115,SMART-Putative GTP-ase activating proteins for the small GTPase, ARF-SM00105,SUPERFAMILY--SSF57863
no
0.73
18
mRNA
_2212
10580
K04441 P38 p38 MAP kinase
no
0.73
19
mRNA
_7548
15916
K08023 LTBP2_3_4 latent transforming growth factor beta binding protein 2/3/4
no
0.73
20
mRNA
_2599
10967
KOG2619 Fucosyltransferase
no
0.72