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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_1740 from
Rhodosporidium toruloides IFO0880
10108
:
K20828 ZNF143_76, STAF zinc finger protein 143/76
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1558
9926
KOG4155 FOG WD40 repeat
no
0.88
2
mRNA
_6455
14823
KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins
no
0.88
3
mRNA
_296
8664
K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3
no
0.87
4
mRNA
_6356
14724
K01477 alc, ALLC allantoicase
no
0.86
5
mRNA
_6180
14548
KOG0218 Mismatch repair MSH3
no
0.85
6
mRNA
_2007
10375
K15331 TRMT2B, TRM2 tRNA (uracil-5-)-methyltransferase
no
0.83
7
mRNA
_3741
12109
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.82
8
mRNA
_7306
15674
KOG1217 Fibrillins and related proteins containing Ca2+-binding EGF-like domains
no
0.82
9
mRNA
_1721
10089
K11483 HOS2 histone deacetylase HOS2
no
0.81
10
mRNA
_1261
9629
K04712 DEGS sphingolipid Delta-4 desaturase
no
0.80
11
mRNA
_2990
11358
SUPERFAMILY--SSF52047
no
0.80
12
mRNA
_6616
14984
Hypothetical Protein
no
0.80
13
mRNA
_3909
12277
K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1
no
0.80
14
mRNA
_6254
14622
K20477 RGP1 RAB6A-GEF complex partner protein 2
no
0.80
15
mRNA
_1287
9655
KOG1087 Cytosolic sorting protein GGA2/TOM1
no
0.79
16
mRNA
_1690
10058
BLAST putative transmembrane protein [Rhizoctonia solani 123E]
no
0.79
17
mRNA
_4764
13132
K12842 SR140 U2-associated protein SR140
no
0.79
18
mRNA
_746
9114
KOG0143 Iron/ascorbate family oxidoreductases
no
0.79
19
mRNA
_2818
11186
K02178 BUB1 checkpoint serine/threonine-protein kinase
no
0.78
20
mRNA
_4560
12928
Hypothetical Protein
no
0.78