Top cofit genes for mRNA_1757 from Rhodosporidium toruloides IFO0880

10125: KOG1426 FOG RCC1 domain

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6282 14650 HMMPfam-SET domain-PF00856,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-SET domain profile.-PS50280,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SMART-SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain-SM00317,SUPERFAMILY--SSF48452,SUPERFAMILY--SSF82199 no 0.80
2 mRNA_5764 14132 K07404 pgl 6-phosphogluconolactonase no 0.71
3 mRNA_8348 16716 K05349 bglX beta-glucosidase no 0.71
4 mRNA_5351 13719 BLAST transmembrane protein, putative [Rhizoctonia solani A... no 0.69
5 mRNA_687 9055 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.67
6 mRNA_6302 14670 K12562 AMPH amphiphysin no 0.66
7 mRNA_5412 13780 ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 no 0.66
8 mRNA_4805 13173 ProSiteProfiles-BTB domain profile.-PS50097 no 0.65
9 mRNA_7397 15765 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.64
10 mRNA_2771 11139 KOG4072 Signal peptidase complex, subunit SPC25 no 0.64
11 mRNA_4577 12945 HMMPfam-CFEM domain-PF05730,SMART--SM00747 no 0.64
12 mRNA_2279 10647 K16369 CHO2 phosphatidylethanolamine N-methyltransferase no 0.64
13 mRNA_2067 10435 BLAST cell morphogenesis protein [Grosmannia clavigera ... no 0.63
14 mRNA_7907 16275 K14951 ATP13A3_4_5 cation-transporting ATPase 13A3/4/5 no 0.63
15 mRNA_7218 15586 K20405 NPRL2 nitrogen permease regulator 2-like protein no 0.63
16 mRNA_6430 14798 KOG3112 Uncharacterized conserved protein no 0.63
17 mRNA_6145 14513 HMMPfam-Protein of unknown function (DUF2456)-PF10445 no 0.63
18 mRNA_68 8436 K12599 SKI2, SKIV2L antiviral helicase SKI2 no 0.62
19 mRNA_1224 9592 BLAST catalytic [Ascochyta rabiei] no 0.62
20 mRNA_3425 11793 K00789 metK S-adenosylmethionine synthetase no 0.62