Top cofit genes for mRNA_1760 from Rhodosporidium toruloides IFO0880

10128: KOG0940 Ubiquitin protein ligase RSP5/NEDD4

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3739 12107 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,ProSiteProfiles-Expansin, family-45 endoglucanase-like domain profile.-PS50842,SUPERFAMILY--SSF50685 no 0.81
2 mRNA_3025 11393 K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1 no 0.73
3 mRNA_7674 16042 SUPERFAMILY--SSF48371 no 0.73
4 mRNA_329 8697 Hypothetical Protein no 0.72
5 mRNA_7364 15732 KOG1337 N-methyltransferase no 0.71
6 mRNA_8458 16826 Hypothetical Protein no 0.71
7 mRNA_2793 11161 KOG3834 Golgi reassembly stacking protein GRASP65, contains PDZ domain no 0.70
8 mRNA_8474 16842 Hypothetical Protein no 0.70
9 mRNA_4495 12863 HMMPfam-TRAPP trafficking subunit Trs65-PF12735 no 0.70
10 mRNA_2830 11198 BLAST 60S ribosomal protein L33-A [Wallemia ichthyophag... no 0.70
11 mRNA_2229 10597 HMMPfam-Hsp70 protein-PF00012,PRINTS-70kDa heat shock protein signature-PR00301,ProSitePatterns-Heat shock hsp70 proteins family signature 2.-PS00329,ProSitePatterns-Heat shock hsp70 proteins family signature 3.-PS01036,SUPERFAMILY--SSF100934,SUPERFAMILY--SSF53067 no 0.70
12 mRNA_1714 10082 K01372 BLMH, pepC bleomycin hydrolase no 0.70
13 mRNA_4063 12431 K10777 LIG4, DNL4 DNA ligase 4 no 0.70
14 mRNA_1139 9507 KOG0948 Nuclear exosomal RNA helicase MTR4, DEAD-box superfamily no 0.70
15 mRNA_1431 9799 Hypothetical Protein no 0.69
16 mRNA_6044 14412 BLAST transmembrane protein, putative [Rhizoctonia solani A... no 0.69
17 mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
18 mRNA_1200 9568 KOG3132 m3G-cap-specific nuclear import receptor (Snurportin1) no 0.68
19 mRNA_2210 10578 K20407 MIOS, MIO WD repeat-containing protein mio no 0.68
20 mRNA_793 9161 KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit no 0.68