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Cofit
Protein
Homologs
Top cofit genes for mRNA_1866 from
Rhodosporidium toruloides IFO0880
10234
:
KOG4455 Uncharacterized conserved protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_8148
16516
HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961
no
0.80
2
mRNA
_8344
16712
K20308 TRAPPC11 trafficking protein particle complex subunit 11
no
0.80
3
mRNA
_2185
10553
HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879
no
0.80
4
mRNA
_5518
13886
SUPERFAMILY--SSF49599
no
0.78
5
mRNA
_8121
16489
Hypothetical Protein
no
0.78
6
mRNA
_5804
14172
Hypothetical Protein
no
0.78
7
mRNA
_213
8581
KOG1362 Choline transporter-like protein
no
0.78
8
mRNA
_7257
15625
ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729
no
0.77
9
mRNA
_2471
10839
K13104 ZNF830, CCDC16 zinc finger protein 830
no
0.77
10
mRNA
_7015
15383
KOG2913 Predicted membrane protein
no
0.76
11
mRNA
_4162
12530
Hypothetical Protein
no
0.76
12
mRNA
_7162
15530
ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103
no
0.76
13
mRNA
_2004
10372
Hypothetical Protein
no
0.76
14
mRNA
_657
9025
Hypothetical Protein
no
0.75
15
mRNA
_4778
13146
Hypothetical Protein
no
0.75
16
mRNA
_890
9258
HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065
no
0.75
17
mRNA
_1811
10179
HMMPfam-Centrosome microtubule-binding domain of Cep57-PF06657
no
0.74
18
mRNA
_7246
15614
Hypothetical Protein
no
0.74
19
mRNA
_8245
16613
HMMPfam-Mitochondrial carrier protein-PF00153,ProSiteProfiles-Solute carrier (Solcar) repeat profile.-PS50920,SUPERFAMILY--SSF103506
no
0.73
20
mRNA
_6823
15191
BLAST TNFR/NGFR cysteine-rich region family protein [Rh...
no
0.73