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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_2028 from
Rhodosporidium toruloides IFO0880
10396
:
HMMPfam-TENA/THI-4/PQQC family-PF03070,SUPERFAMILY--SSF48613
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_208
8576
K19270 yfbT, yniC sugar-phosphatase
no
0.82
2
mRNA
_5865
14233
KOG0800 FOG Predicted E3 ubiquitin ligase
no
0.80
3
mRNA
_5570
13938
K06067 HDAC1_2 histone deacetylase 1/2
no
0.79
4
mRNA
_8011
16379
K09537 DNAJC17 DnaJ homolog subfamily C member 17
no
0.78
5
mRNA
_6412
14780
HMMPfam-F-box-like-PF12937
no
0.75
6
mRNA
_2361
10729
Hypothetical Protein
no
0.75
7
mRNA
_5652
14020
KOG4443 Putative transcription factor HALR/MLL3, involved in embryonic development
no
0.74
8
mRNA
_5077
13445
KOG1663 O-methyltransferase
no
0.74
9
mRNA
_8235
16603
Hypothetical Protein
no
0.74
10
mRNA
_4681
13049
K01539 ATP1A sodium/potassium-transporting ATPase subunit alpha
no
0.74
11
mRNA
_6455
14823
KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins
no
0.74
12
mRNA
_199
8567
Hypothetical Protein
no
0.73
13
mRNA
_1588
9956
HMMPfam-Domain of unknown function (DUF202)-PF02656
no
0.73
14
mRNA
_2076
10444
K15073 UFO1 ubiquitin ligase complex F-box protein UFO1
no
0.73
15
mRNA
_7557
15925
Hypothetical Protein
no
0.73
16
mRNA
_3850
12218
BLAST Protein kinase-like domain protein [Cordyceps confrag...
no
0.72
17
mRNA
_5489
13857
KOG1263 Multicopper oxidases
no
0.72
18
mRNA
_252
8620
Hypothetical Protein
no
0.71
19
mRNA
_5543
13911
K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme
no
0.71
20
mRNA
_6261
14629
K09274 K09274 HMG box factor, other
no
0.71