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Cofit
Protein
Homologs
Top cofit genes for mRNA_2108 from
Rhodosporidium toruloides IFO0880
10476
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_927
9295
KOG1611 Predicted short chain-type dehydrogenase
no
0.77
2
mRNA
_326
8694
K17983 SHE9 sensitive to high expression protein 9, mitochondrial
no
0.77
3
mRNA
_928
9296
Hypothetical Protein
no
0.77
4
mRNA
_860
9228
HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268
no
0.76
5
mRNA
_3574
11942
ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.76
6
mRNA
_1442
9810
K03549 kup KUP system potassium uptake protein
no
0.75
7
mRNA
_4732
13100
HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338
no
0.75
8
mRNA
_1909
10277
K01426 E3.5.1.4, amiE amidase
no
0.75
9
mRNA
_7507
15875
K17987 NBR1 next to BRCA1 gene 1 protein
no
0.75
10
mRNA
_8153
16521
HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626
no
0.75
11
mRNA
_4787
13155
SUPERFAMILY--SSF49785
no
0.74
12
mRNA
_4986
13354
K17943 PUM pumilio RNA-binding family
no
0.73
13
mRNA
_7034
15402
HMMPfam-UBA/TS-N domain-PF00627,HMMPfam-Uncharacterized conserved protein (DUF2196)-PF09962,ProSiteProfiles-Ubiquitin-associated domain (UBA) profile.-PS50030,SUPERFAMILY--SSF46934
no
0.73
14
mRNA
_5762
14130
SUPERFAMILY--SSF47095
no
0.72
15
mRNA
_1174
9542
K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme
no
0.72
16
mRNA
_3317
11685
SUPERFAMILY--SSF52540
no
0.72
17
mRNA
_5707
14075
Hypothetical Protein
no
0.72
18
mRNA
_2801
11169
Hypothetical Protein
no
0.72
19
mRNA
_6011
14379
HMMPfam-F-box-like-PF12937
no
0.71
20
mRNA
_6864
15232
K18416 THEX1, ERI1 3'-5' exoribonuclease 1
no
0.71