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Cofit
Protein
Homologs
Top cofit genes for mRNA_2162 from
Rhodosporidium toruloides IFO0880
10530
:
K15027 EIF2D translation initiation factor 2D
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_2338
10706
K05545 DUS4 tRNA-dihydrouridine synthase 4
no
0.87
2
mRNA
_4215
12583
HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350
no
0.86
3
mRNA
_4173
12541
KOG2348 Urea transporter
no
0.84
4
mRNA
_3677
12045
KOG0266 WD40 repeat-containing protein
no
0.84
5
mRNA
_7421
15789
Hypothetical Protein
no
0.81
6
mRNA
_3623
11991
HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.80
7
mRNA
_3768
12136
HMMPfam-Protein of unknown function (DUF1275)-PF06912
no
0.79
8
mRNA
_5274
13642
KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
no
0.78
9
mRNA
_3958
12326
Hypothetical Protein
no
0.77
10
mRNA
_1633
10001
HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473
no
0.76
11
mRNA
_7690
16058
BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70...
no
0.76
12
mRNA
_7984
16352
KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family
no
0.76
13
mRNA
_635
9003
KOG1470 Phosphatidylinositol transfer protein PDR16 and related proteins
no
0.75
14
mRNA
_6325
14693
Hypothetical Protein
no
0.75
15
mRNA
_6387
14755
Hypothetical Protein
no
0.75
16
mRNA
_4307
12675
Hypothetical Protein
no
0.75
17
mRNA
_4562
12930
K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51
no
0.75
18
mRNA
_7908
16276
K03783 punA, PNP purine-nucleoside phosphorylase
no
0.74
19
mRNA
_51
8419
K10392 KIF1 kinesin family member 1
no
0.74
20
mRNA
_5615
13983
HMMPfam-GRF zinc finger-PF06839
no
0.74