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Cofit
Protein
Homologs
Top cofit genes for mRNA_2174 from
Rhodosporidium toruloides IFO0880
10542
:
K14009 BCAP31, BAP31 B-cell receptor-associated protein 31
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1430
9798
KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1
no
0.85
2
mRNA
_1089
9457
K01638 aceB, glcB malate synthase
no
0.79
3
mRNA
_6532
14900
K11352 NDUFA12 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
no
0.78
4
mRNA
_2443
10811
HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113
no
0.77
5
mRNA
_5815
14183
KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases
no
0.76
6
mRNA
_5693
14061
KOG4186 Peroxisomal biogenesis protein (peroxin)
no
0.76
7
mRNA
_5137
13505
K13342 PEX5, PXR1 peroxin-5
no
0.76
8
mRNA
_5624
13992
KOG1611 Predicted short chain-type dehydrogenase
no
0.75
9
mRNA
_3622
11990
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.75
10
mRNA
_4202
12570
K00249 ACADM, acd acyl-CoA dehydrogenase
no
0.75
11
mRNA
_5031
13399
HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785
no
0.75
12
mRNA
_5702
14070
K09478 ACADSB short/branched chain acyl-CoA dehydrogenase
no
0.74
13
mRNA
_4587
12955
HMMPfam-Complex1_LYR-like-PF13232
no
0.73
14
mRNA
_299
8667
ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199
no
0.73
15
mRNA
_5654
14022
K01637 E4.1.3.1, aceA isocitrate lyase
no
0.72
16
mRNA
_3734
12102
Interpro Protein HRI1
no
0.72
17
mRNA
_4374
12742
K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase
no
0.72
18
mRNA
_6025
14393
KOG0324 Uncharacterized conserved protein
no
0.72
19
mRNA
_6437
14805
K07511 ECHS1 enoyl-CoA hydratase
no
0.71
20
mRNA
_4156
12524
KOG1242 Protein containing adaptin N-terminal region
no
0.71