Top cofit genes for mRNA_2292 from Rhodosporidium toruloides IFO0880

10660: K01669 phrB deoxyribodipyrimidine photo-lyase
SEED: Deoxyribodipyrimidine photolyase (EC 4.1.99.3)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_2910	11278	K03657 uvrD, pcrA DNA helicase II / ATP-dependent DNA helicase PcrA	no	0.76
2	mRNA_2400	10768	Hypothetical Protein	no	0.75
3	mRNA_5510	13878	ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850	no	0.73
4	mRNA_3448	11816	HMMPfam-Peptidase M50B-like-PF13398	no	0.71
5	mRNA_1829	10197	K20238 E2.1.1.317 sphingolipid C9-methyltransferase	no	0.71
6	mRNA_6783	15151	HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316	no	0.70
7	mRNA_371	8739	HMMPfam-Protein of unknown function (DUF2408)-PF10303	no	0.70
8	mRNA_7305	15673	Hypothetical Protein	no	0.67
9	mRNA_4962	13330	Hypothetical Protein	no	0.65
10	mRNA_6917	15285	K04883 KCNAB2 potassium voltage-gated channel Shaker-related subfamily A, beta member 2	no	0.65
11	mRNA_8360	16728	K02739 PSMB7 20S proteasome subunit beta 2	no	0.64
12	mRNA_1244	9612	SUPERFAMILY--SSF52047	no	0.64
13	mRNA_5722	14090	SUPERFAMILY--SSF52047	no	0.64
14	mRNA_5733	14101	KOG4197 FOG PPR repeat	no	0.63
15	mRNA_4264	12632	Hypothetical Protein	no	0.63
16	mRNA_3075	11443	K07652 vicK two-component system, OmpR family, sensor histidine kinase VicK	no	0.63
17	mRNA_4013	12381	HMMPfam-DJ-1/PfpI family-PF01965,HMMPfam-N-terminal domain of DJ-1_PfpI family-PF13587,SUPERFAMILY--SSF52317	no	0.63
18	mRNA_1991	10359	K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family	no	0.63
19	mRNA_3484	11852	Hypothetical Protein	no	0.63
20	mRNA_1114	9482	KOG1396 Uncharacterized conserved protein	no	0.62