Top cofit genes for mRNA_2328 from Rhodosporidium toruloides IFO0880

10696: KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5923 14291 Hypothetical Protein no 0.70
2 mRNA_4075 12443 Hypothetical Protein no 0.70
3 mRNA_1729 10097 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.69
4 mRNA_2325 10693 Hypothetical Protein no 0.68
5 mRNA_6625 14993 KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins no 0.66
6 mRNA_7984 16352 KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family no 0.63
7 mRNA_6038 14406 Hypothetical Protein no 0.63
8 mRNA_5970 14338 Hypothetical Protein no 0.62
9 mRNA_2617 10985 HMMPfam-Carbonic anhydrase-PF00484,SMART-Carbonic anhydrase-SM00947,SUPERFAMILY--SSF53056 no 0.62
10 mRNA_4997 13365 HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906 no 0.62
11 mRNA_6088 14456 KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes no 0.61
12 mRNA_5954 14322 HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665 no 0.61
13 mRNA_1226 9594 K01262 pepP Xaa-Pro aminopeptidase no 0.61
14 mRNA_4939 13307 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.61
15 mRNA_3867 12235 KOG1812 Predicted E3 ubiquitin ligase no 0.60
16 mRNA_3350 11718 KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily no 0.60
17 mRNA_1477 9845 Hypothetical Protein no 0.60
18 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.60
19 mRNA_2992 11360 Hypothetical Protein no 0.59
20 mRNA_3205 11573 K13281 uvsE, UVE1 UV DNA damage endonuclease no 0.59