Top cofit genes for mRNA_2338 from Rhodosporidium toruloides IFO0880

10706: K05545 DUS4 tRNA-dihydrouridine synthase 4
SEED: tRNA dihydrouridine synthase B (EC 1.-.-.-)

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2162 10530 K15027 EIF2D translation initiation factor 2D no 0.87
2 mRNA_6203 14571 HMMPfam-HbrB-like-PF08539 no 0.86
3 mRNA_7421 15789 Hypothetical Protein no 0.83
4 mRNA_8449 16817 KOG0198 MEKK and related serine/threonine protein kinases no 0.83
5 mRNA_7690 16058 BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70... no 0.83
6 mRNA_469 8837 KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain no 0.80
7 mRNA_3623 11991 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.79
8 mRNA_4173 12541 KOG2348 Urea transporter no 0.79
9 mRNA_4562 12930 K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51 no 0.78
10 mRNA_6170 14538 KOG3476 Microtubule-associated protein CRIPT no 0.77
11 mRNA_3650 12018 Hypothetical Protein no 0.77
12 mRNA_7984 16352 KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family no 0.77
13 mRNA_4215 12583 HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350 no 0.77
14 mRNA_3077 11445 K07542 PIGV phosphatidylinositol glycan, class V no 0.77
15 mRNA_5274 13642 KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily no 0.77
16 mRNA_7261 15629 SUPERFAMILY--SSF51735 no 0.77
17 mRNA_2962 11330 KOG3841 TEF-1 and related transcription factor, TEAD family no 0.76
18 mRNA_5615 13983 HMMPfam-GRF zinc finger-PF06839 no 0.76
19 mRNA_2304 10672 Hypothetical Protein no 0.76
20 mRNA_1797 10165 KOG2641 Predicted seven transmembrane receptor - rhodopsin family no 0.75