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Cofit
Protein
Homologs
Top cofit genes for mRNA_2445 from
Rhodosporidium toruloides IFO0880
10813
:
HMMPfam-Protein of unknown function (DUF3533)-PF12051
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1225
9593
KOG2195 Transferrin receptor and related proteins containing the protease-associated (PA) domain
no
0.82
2
mRNA
_2647
11015
Hypothetical Protein
no
0.82
3
mRNA
_4054
12422
KOG2973 Uncharacterized conserved protein
no
0.82
4
mRNA
_2461
10829
Hypothetical Protein
no
0.81
5
mRNA
_2635
11003
KOG2615 Permease of the major facilitator superfamily
no
0.81
6
mRNA
_4009
12377
K10639 CCNB1IP1, HEI10 E3 ubiquitin-protein ligase CCNP1IP1
no
0.78
7
mRNA
_6674
15042
HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232
no
0.78
8
mRNA
_4206
12574
Hypothetical Protein
no
0.78
9
mRNA
_5334
13702
K14563 NOP1, FBL rRNA 2'-O-methyltransferase fibrillarin
no
0.78
10
mRNA
_3559
11927
K18622 ADD adducin
no
0.78
11
mRNA
_5222
13590
Hypothetical Protein
no
0.77
12
mRNA
_3424
11792
Hypothetical Protein
no
0.76
13
mRNA
_1272
9640
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.75
14
mRNA
_732
9100
HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482
no
0.74
15
mRNA
_5863
14231
K09281 K09281 copper-fist transcription factor
no
0.74
16
mRNA
_7974
16342
Hypothetical Protein
no
0.73
17
mRNA
_4962
13330
Hypothetical Protein
no
0.73
18
mRNA
_5
8373
SUPERFAMILY--SSF51695
no
0.72
19
mRNA
_7707
16075
HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098
no
0.72
20
mRNA
_4001
12369
Hypothetical Protein
no
0.72