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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_2718 from
Rhodosporidium toruloides IFO0880
11086
:
SUPERFAMILY--SSF50475
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1670
10038
K15918 GLYK D-glycerate 3-kinase
no
0.80
2
mRNA
_8186
16554
Hypothetical Protein
no
0.73
3
mRNA
_1517
9885
HMMPfam-Alternative oxidase-PF01786,PIRSF--PIRSF005229
no
0.73
4
mRNA
_7428
15796
Interpro XLF-Cernunnos, XRcc4-like factor, NHEJ component
no
0.73
5
mRNA
_7159
15527
HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.72
6
mRNA
_2134
10502
K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5
no
0.72
7
mRNA
_3881
12249
Hypothetical Protein
no
0.71
8
mRNA
_6915
15283
K01130 E3.1.6.1, aslA arylsulfatase
no
0.70
9
mRNA
_2815
11183
K09699 DBT, bkdB 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)
no
0.69
10
mRNA
_8217
16585
KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily
no
0.69
11
mRNA
_6449
14817
HMMPfam-Protein of unknown function (DUF1399)-PF07173
no
0.69
12
mRNA
_7379
15747
SUPERFAMILY--SSF49344
no
0.69
13
mRNA
_3070
11438
Hypothetical Protein
no
0.67
14
mRNA
_5896
14264
K07573 CSL4, EXOSC1 exosome complex component CSL4
no
0.67
15
mRNA
_6853
15221
Interpro Altered inheritance of mitochondria 5
no
0.67
16
mRNA
_849
9217
HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047
no
0.66
17
mRNA
_4506
12874
KOG4754 Predicted phosphoglycerate mutase
no
0.66
18
mRNA
_1767
10135
HMMPfam-F-box-like-PF12937
no
0.66
19
mRNA
_2563
10931
Interpro F-box-like
no
0.66
20
mRNA
_6242
14610
K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase
no
0.66