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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_2745 from
Rhodosporidium toruloides IFO0880
11113
:
HMMPfam-GlcNAc-PI de-N-acetylase-PF02585,SUPERFAMILY--SSF102588,SUPERFAMILY--SSF49785
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6411
14779
BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M...
no
0.74
2
mRNA
_4089
12457
Hypothetical Protein
no
0.72
3
mRNA
_5156
13524
K00108 betA, CHDH choline dehydrogenase
no
0.70
4
mRNA
_4474
12842
K01426 E3.5.1.4, amiE amidase
no
0.68
5
mRNA
_1300
9668
BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy...
no
0.68
6
mRNA
_5018
13386
Hypothetical Protein
no
0.68
7
mRNA
_5668
14036
K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
no
0.67
8
mRNA
_8429
16797
Hypothetical Protein
no
0.66
9
mRNA
_7476
15844
K07243 FTR, FTH1, efeU high-affinity iron transporter
no
0.66
10
mRNA
_5476
13844
KOG4719 Nuclear pore complex protein
no
0.65
11
mRNA
_2871
11239
HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959
no
0.65
12
mRNA
_6735
15103
Hypothetical Protein
no
0.64
13
mRNA
_164
8532
Hypothetical Protein
no
0.63
14
mRNA
_672
9040
Hypothetical Protein
no
0.63
15
mRNA
_5299
13667
BLAST RNA polymerase sigma factor, sigma-70 family [Rho...
no
0.63
16
mRNA
_5079
13447
HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145
no
0.63
17
mRNA
_8041
16409
K13350 PXMP4, PMP24 peroxisomal membrane protein 4
no
0.63
18
mRNA
_4387
12755
HMMPfam-Ctf8-PF09696
no
0.63
19
mRNA
_2420
10788
KOG2618 Uncharacterized conserved protein
no
0.61
20
mRNA
_4721
13089
K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4
no
0.61