Top cofit genes for mRNA_3056 from Rhodosporidium toruloides IFO0880

11424: K11290 SET, TAF1, I2PP2A template-activating factor I

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_1578	9946	K20237 NUD1 protein NUD1	no	0.85
2	mRNA_7141	15509	BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC....	no	0.82
3	mRNA_6747	15115	Hypothetical Protein	no	0.79
4	mRNA_2179	10547	K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures	no	0.79
5	mRNA_3135	11503	HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474	no	0.76
6	mRNA_183	8551	KOG4463 Uncharacterized conserved protein	no	0.76
7	mRNA_2566	10934	KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)	no	0.75
8	mRNA_8002	16370	KOG0132 RNA polymerase II C-terminal domain-binding protein RA4, contains RPR and RRM domains	no	0.75
9	mRNA_436	8804	HMMPfam-CLASP N terminal-PF12348	no	0.75
10	mRNA_2229	10597	HMMPfam-Hsp70 protein-PF00012,PRINTS-70kDa heat shock protein signature-PR00301,ProSitePatterns-Heat shock hsp70 proteins family signature 2.-PS00329,ProSitePatterns-Heat shock hsp70 proteins family signature 3.-PS01036,SUPERFAMILY--SSF100934,SUPERFAMILY--SSF53067	no	0.73
11	mRNA_2893	11261	HMMPfam-Protein of unknown function (DUF2823)-PF11034	no	0.71
12	mRNA_3025	11393	K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1	no	0.71
13	mRNA_1614	9982	KOG2819 Uncharacterized conserved protein	no	0.71
14	mRNA_7389	15757	Hypothetical Protein	no	0.71
15	mRNA_3611	11979	Hypothetical Protein	no	0.70
16	mRNA_3843	12211	HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232	no	0.70
17	mRNA_971	9339	KOG2262 Sexual differentiation process protein ISP4	no	0.70
18	mRNA_2972	11340	K03850 ALG10 alpha-1,2-glucosyltransferase	no	0.70
19	mRNA_447	8815	BLAST protein of unknown function [Taphrina deformans PYCC ...	no	0.70
20	mRNA_4935	13303	BLAST salivary gland secretion 1 [Moniliophthora roreri...	no	0.70