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Cofit
Protein
Homologs
Top cofit genes for mRNA_3135 from
Rhodosporidium toruloides IFO0880
11503
:
HMMPfam-Alpha/beta hydrolase family-PF12695,SUPERFAMILY--SSF53474
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_2893
11261
HMMPfam-Protein of unknown function (DUF2823)-PF11034
no
0.86
2
mRNA
_8064
16432
HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
no
0.82
3
mRNA
_5047
13415
HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112
no
0.81
4
mRNA
_7056
15424
K01557 FAHD1 acylpyruvate hydrolase
no
0.80
5
mRNA
_2756
11124
KOG2450 Aldehyde dehydrogenase
no
0.80
6
mRNA
_1784
10152
KOG0257 Kynurenine aminotransferase, glutamine transaminase K
no
0.80
7
mRNA
_3992
12360
KOG0627 Heat shock transcription factor
no
0.80
8
mRNA
_8328
16696
Hypothetical Protein
no
0.79
9
mRNA
_8063
16431
HMMPfam-Protein of unknown function (DUF3500)-PF12006
no
0.78
10
mRNA
_2566
10934
KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)
no
0.78
11
mRNA
_7141
15509
BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC....
no
0.78
12
mRNA
_8404
16772
Hypothetical Protein
no
0.77
13
mRNA
_6826
15194
KOG2061 Uncharacterized MYND Zn-finger protein
no
0.77
14
mRNA
_7752
16120
Hypothetical Protein
no
0.77
15
mRNA
_6763
15131
K11584 PPP2R5 serine/threonine-protein phosphatase 2A regulatory subunit B'
no
0.76
16
mRNA
_3056
11424
K11290 SET, TAF1, I2PP2A template-activating factor I
no
0.76
17
mRNA
_1092
9460
SUPERFAMILY--SSF52833
no
0.76
18
mRNA
_2244
10612
KOG4120 G/T mismatch-specific thymine DNA glycosylase
no
0.76
19
mRNA
_6498
14866
K00226 pyrD dihydroorotate dehydrogenase (fumarate)
no
0.76
20
mRNA
_2179
10547
K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures
no
0.75