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Cofit
Protein
Homologs
Top cofit genes for mRNA_3170 from
Rhodosporidium toruloides IFO0880
11538
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_7659
16027
BLAST acetylornithine transaminase [Moesziomyces antarc...
no
0.94
2
mRNA
_8369
16737
HMMPfam-Transient receptor potential (TRP) ion channel-PF06011
no
0.93
3
mRNA
_2040
10408
K11729 ACAD10 acyl-CoA dehydrogenase family member 10
no
0.92
4
mRNA
_5872
14240
HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233
no
0.92
5
mRNA
_5031
13399
HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785
no
0.91
6
mRNA
_7137
15505
KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein)
no
0.91
7
mRNA
_2408
10776
K07975 K07975 Rho family, other
no
0.89
8
mRNA
_4689
13057
Hypothetical Protein
no
0.89
9
mRNA
_299
8667
ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199
no
0.89
10
mRNA
_4484
12852
KOG2588 Predicted DNA-binding protein
no
0.88
11
mRNA
_8338
16706
Hypothetical Protein
no
0.87
12
mRNA
_2577
10945
HMMPfam-Protein of unknown function (DUF3767)-PF12597
no
0.87
13
mRNA
_4476
12844
HMMPfam-Domain of unknown function (DUF543)-PF04418
no
0.87
14
mRNA
_4202
12570
K00249 ACADM, acd acyl-CoA dehydrogenase
no
0.86
15
mRNA
_3772
12140
K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3
no
0.86
16
mRNA
_540
8908
KOG2571 Chitin synthase/hyaluronan synthase (glycosyltransferases)
no
0.86
17
mRNA
_5702
14070
K09478 ACADSB short/branched chain acyl-CoA dehydrogenase
no
0.86
18
mRNA
_4374
12742
K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase
no
0.86
19
mRNA
_5913
14281
K14455 GOT2 aspartate aminotransferase, mitochondrial
no
0.86
20
mRNA
_707
9075
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.85