Top cofit genes for mRNA_3177 from Rhodosporidium toruloides IFO0880

11545: KOG2164 Predicted E3 ubiquitin ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_4202	12570	K00249 ACADM, acd acyl-CoA dehydrogenase	no	0.86
2	mRNA_1334	9702	HMMPfam-RNA polymerase II transcription elongation factor-PF09816	no	0.82
3	mRNA_2780	11148	KOG0546 HSP90 co-chaperone CPR7/Cyclophilin	no	0.80
4	mRNA_1430	9798	KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1	no	0.79
5	mRNA_3891	12259	K07889 RAB5C Ras-related protein Rab-5C	no	0.77
6	mRNA_963	9331	K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	no	0.77
7	mRNA_7166	15534	K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase	no	0.77
8	mRNA_5872	14240	HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233	no	0.77
9	mRNA_1850	10218	K00311 ETFDH electron-transferring-flavoprotein dehydrogenase	no	0.76
10	mRNA_2443	10811	HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113	no	0.76
11	mRNA_6441	14809	K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit	no	0.76
12	mRNA_5693	14061	KOG4186 Peroxisomal biogenesis protein (peroxin)	no	0.75
13	mRNA_4271	12639	K01196 AGL glycogen debranching enzyme	no	0.75
14	mRNA_1419	9787	HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729	no	0.75
15	mRNA_8410	16778	K12761 SNF1 carbon catabolite-derepressing protein kinase	no	0.75
16	mRNA_324	8692	K00135 gabD succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase	no	0.75
17	mRNA_7663	16031	K03305 TC.POT proton-dependent oligopeptide transporter, POT family	no	0.74
18	mRNA_3089	11457	BLAST Rho GTPase-activating protein 30 [Larimichthys crocea]	no	0.73
19	mRNA_3622	11990	KOG0254 Predicted transporter (major facilitator superfamily)	no	0.72
20	mRNA_7058	15426	KOG0206 P-type ATPase	no	0.72