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Cofit
Protein
Homologs
Top cofit genes for mRNA_3192 from
Rhodosporidium toruloides IFO0880
11560
:
HMMPfam-Hypothetical protein FLILHELTA-PF10306
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5160
13528
Hypothetical Protein
no
0.79
2
mRNA
_1932
10300
BLAST family 69 glycosyltransferase [Melampsora larici-...
no
0.78
3
mRNA
_4879
13247
KOG1259 Nischarin, modulator of integrin alpha5 subunit action
no
0.77
4
mRNA
_369
8737
K20309 TRAPPC12 trafficking protein particle complex subunit 12
no
0.77
5
mRNA
_8034
16402
K00898 PDK2_3_4 pyruvate dehydrogenase kinase 2/3/4
no
0.76
6
mRNA
_4099
12467
HMMPfam-Phenolic acid decarboxylase (PAD)-PF05870,SUPERFAMILY--SSF50814
no
0.75
7
mRNA
_6833
15201
HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801
no
0.74
8
mRNA
_2365
10733
HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562
no
0.73
9
mRNA
_815
9183
K04555 UBE2G2, UBC7 ubiquitin-conjugating enzyme E2 G2
no
0.73
10
mRNA
_6103
14471
K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein)
no
0.72
11
mRNA
_7055
15423
K03841 FBP, fbp fructose-1,6-bisphosphatase I
no
0.71
12
mRNA
_5773
14141
Hypothetical Protein
no
0.71
13
mRNA
_7159
15527
HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.70
14
mRNA
_5043
13411
PIRSF--PIRSF022976
no
0.69
15
mRNA
_4587
12955
HMMPfam-Complex1_LYR-like-PF13232
no
0.69
16
mRNA
_2837
11205
KOG4100 Uncharacterized conserved protein
no
0.69
17
mRNA
_7527
15895
K20031 ZDHHC6 palmitoyltransferase ZDHHC6
no
0.69
18
mRNA
_2835
11203
K00022 HADH 3-hydroxyacyl-CoA dehydrogenase
no
0.69
19
mRNA
_5877
14245
K00624 E2.3.1.7 carnitine O-acetyltransferase
no
0.69
20
mRNA
_707
9075
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.69