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Cofit
Protein
Homologs
Top cofit genes for mRNA_3203 from
Rhodosporidium toruloides IFO0880
11571
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5289
13657
K00344 qor, CRYZ NADPH2-quinone reductase
no
0.81
2
mRNA
_2626
10994
Interpro GDP-fucose protein O-fucosyltransferase
no
0.80
3
mRNA
_4469
12837
Hypothetical Protein
no
0.79
4
mRNA
_4778
13146
Hypothetical Protein
no
0.79
5
mRNA
_1982
10350
HMMPfam-Copper binding proteins, plastocyanin/azurin family-PF00127,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF49503
no
0.78
6
mRNA
_2185
10553
HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879
no
0.77
7
mRNA
_3468
11836
ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112
no
0.76
8
mRNA
_177
8545
KOG4096 Uncharacterized conserved protein
no
0.76
9
mRNA
_2287
10655
KOG3870 Uncharacterized conserved protein
no
0.75
10
mRNA
_480
8848
ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SUPERFAMILY--SSF46689
no
0.75
11
mRNA
_4785
13153
KOG1577 Aldo/keto reductase family proteins
no
0.75
12
mRNA
_3612
11980
Hypothetical Protein
no
0.74
13
mRNA
_6738
15106
Hypothetical Protein
no
0.74
14
mRNA
_4670
13038
Hypothetical Protein
no
0.74
15
mRNA
_8390
16758
K00387 SUOX sulfite oxidase
no
0.74
16
mRNA
_5335
13703
HMMPfam-Domain of unknown function (DUF4202)-PF13875
no
0.74
17
mRNA
_5637
14005
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
no
0.74
18
mRNA
_5625
13993
KOG1611 Predicted short chain-type dehydrogenase
no
0.73
19
mRNA
_3238
11606
BLAST RNA replication protein [Rhizoctonia solani]
no
0.73
20
mRNA
_6058
14426
SUPERFAMILY--SSF52047
no
0.73