Top cofit genes for mRNA_3205 from Rhodosporidium toruloides IFO0880

11573: K13281 uvsE, UVE1 UV DNA damage endonuclease

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_4387	12755	HMMPfam-Ctf8-PF09696	no	0.82
2	mRNA_4328	12696	HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383	no	0.79
3	mRNA_6196	14564	Hypothetical Protein	no	0.78
4	mRNA_1546	9914	K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23	no	0.78
5	mRNA_5456	13824	K07034 K07034 uncharacterized protein	no	0.78
6	mRNA_3749	12117	HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850	no	0.77
7	mRNA_7147	15515	Hypothetical Protein	no	0.77
8	mRNA_5954	14322	HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665	no	0.76
9	mRNA_5294	13662	K02830 HRAD1, RAD17 cell cycle checkpoint protein	no	0.76
10	mRNA_4889	13257	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.75
11	mRNA_2804	11172	K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2	no	0.75
12	mRNA_2516	10884	KOG0627 Heat shock transcription factor	no	0.74
13	mRNA_925	9293	K10704 UBE2V ubiquitin-conjugating enzyme E2 variant	no	0.74
14	mRNA_4075	12443	Hypothetical Protein	no	0.74
15	mRNA_2536	10904	K15601 KDM3 lysine-specific demethylase 3	no	0.74
16	mRNA_4043	12411	Hypothetical Protein	no	0.74
17	mRNA_8135	16503	K00804 GGPS1 geranylgeranyl diphosphate synthase, type III	no	0.74
18	mRNA_7912	16280	K11434 PRMT1 type I protein arginine methyltransferase	no	0.73
19	mRNA_3632	12000	HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112	no	0.72
20	mRNA_3886	12254	K14298 RAE1, GLE2 mRNA export factor	no	0.72