Top cofit genes for mRNA_3228 from Rhodosporidium toruloides IFO0880

11596: Hypothetical Protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_290	8658	HMMPfam-Major Facilitator Superfamily-PF07690,ProSitePatterns-Sugar transport proteins signature 1.-PS00216,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473	no	0.80
2	mRNA_4926	13294	ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013	no	0.75
3	mRNA_1662	10030	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.74
4	mRNA_1926	10294	HMMPfam-GDSL-like Lipase/Acylhydrolase family-PF13472,SUPERFAMILY--SSF52266	no	0.71
5	mRNA_7180	15548	Hypothetical Protein	no	0.70
6	mRNA_5874	14242	K04536 GNB1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	no	0.69
7	mRNA_7795	16163	ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006	no	0.69
8	mRNA_1714	10082	K01372 BLMH, pepC bleomycin hydrolase	no	0.69
9	mRNA_8069	16437	K11240 MSG5 tyrosine-protein phosphatase MSG5	no	0.69
10	mRNA_5755	14123	HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277	no	0.68
11	mRNA_8237	16605	K04345 PKA protein kinase A	no	0.67
12	mRNA_1416	9784	BLAST amino-acid permease [Pseudozyma hubeiensis SY62]	no	0.66
13	mRNA_2014	10382	K20697 GNBP1 gram-negative bacteria-binding protein 1	no	0.66
14	mRNA_3977	12345	KOG4689 Predicted RNase	no	0.66
15	mRNA_3278	11646	K14152 HIS4 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase / histidinol dehydrogenase	no	0.66
16	mRNA_3728	12096	K11142 LAP3 cytosol aminopeptidase	no	0.66
17	mRNA_4968	13336	KOG4464 Signaling protein RIC-8/synembryn (regulates neurotransmitter secretion)	no	0.66
18	mRNA_570	8938	Hypothetical Protein	no	0.65
19	mRNA_5424	13792	KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily)	no	0.65
20	mRNA_2124	10492	Hypothetical Protein	no	0.65