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Cofit
Protein
Homologs
Top cofit genes for mRNA_3350 from
Rhodosporidium toruloides IFO0880
11718
:
KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_7216
15584
K01535 PMA1, PMA2 H+-transporting ATPase
no
0.85
2
mRNA
_7797
16165
Hypothetical Protein
no
0.82
3
mRNA
_2548
10916
KOG1943 Beta-tubulin folding cofactor D
no
0.81
4
mRNA
_2219
10587
Hypothetical Protein
no
0.81
5
mRNA
_6635
15003
HMMPfam-Peptidase family M48-PF01435
no
0.80
6
mRNA
_4961
13329
Hypothetical Protein
no
0.80
7
mRNA
_6311
14679
K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7
no
0.79
8
mRNA
_6559
14927
Hypothetical Protein
no
0.78
9
mRNA
_5798
14166
KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein
no
0.77
10
mRNA
_5019
13387
HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959
no
0.76
11
mRNA
_2202
10570
K00365 uaZ urate oxidase
no
0.75
12
mRNA
_4041
12409
HMMPfam-Sds3-like-PF08598
no
0.75
13
mRNA
_4166
12534
K12597 AIR1_2 protein AIR1/2
no
0.75
14
mRNA
_8119
16487
Hypothetical Protein
no
0.75
15
mRNA
_3601
11969
K11367 CHD1 chromodomain-helicase-DNA-binding protein 1
no
0.75
16
mRNA
_3634
12002
KOG2456 Aldehyde dehydrogenase
no
0.74
17
mRNA
_8003
16371
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.74
18
mRNA
_581
8949
Interpro ERCC4 domain 0
no
0.74
19
mRNA
_5761
14129
K14997 SLC38A11 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11
no
0.74
20
mRNA
_7992
16360
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.74