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Cofit
Protein
Homologs
Top cofit genes for mRNA_3359 from
Rhodosporidium toruloides IFO0880
11727
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5010
13378
K17576 PPP1R37, LRRC68 protein phosphatase 1 regulatory subunit 37
no
0.75
2
mRNA
_3816
12184
KOG3613 Dopey and related predicted leucine zipper transcription factors
no
0.75
3
mRNA
_2784
11152
K20241 WDR44, RAB11BP WD repeat-containing protein 44
no
0.75
4
mRNA
_7671
16039
SUPERFAMILY--SSF56112
no
0.75
5
mRNA
_1592
9960
HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959
no
0.73
6
mRNA
_7674
16042
SUPERFAMILY--SSF48371
no
0.72
7
mRNA
_890
9258
HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065
no
0.71
8
mRNA
_2386
10754
K01530 E3.6.3.1 phospholipid-translocating ATPase
no
0.70
9
mRNA
_7043
15411
Hypothetical Protein
no
0.69
10
mRNA
_4773
13141
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.69
11
mRNA
_7179
15547
Hypothetical Protein
no
0.69
12
mRNA
_3445
11813
HMMPfam-BRO1-like domain-PF03097,ProSiteProfiles-BRO1 domain profile.-PS51180,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SMART-BRO1-like domain-SM01041
no
0.68
13
mRNA
_728
9096
K18669 DYRK2_3_4 dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4
no
0.68
14
mRNA
_3674
12042
K00128 ALDH aldehyde dehydrogenase (NAD+)
no
0.68
15
mRNA
_1061
9429
BLAST heat shock 70 kDa protein 12A [Rhizoctonia solani AG-...
no
0.67
16
mRNA
_1664
10032
Hypothetical Protein
no
0.67
17
mRNA
_2626
10994
Interpro GDP-fucose protein O-fucosyltransferase
no
0.66
18
mRNA
_3890
12258
HMMPfam-Pal1 cell morphology protein-PF08316
no
0.65
19
mRNA
_8402
16770
K07579 K07579 putative methylase
no
0.65
20
mRNA
_7281
15649
HMMPfam-FAR1 DNA-binding domain-PF03101
no
0.65