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Cofit
Protein
Homologs
Top cofit genes for mRNA_3393 from
Rhodosporidium toruloides IFO0880
11761
:
KOG3662 Cell division control protein/predicted DNA repair exonuclease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_2587
10955
K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1
no
0.88
2
mRNA
_6832
15200
K18158 NCA2 nuclear control of ATPase protein 2
no
0.88
3
mRNA
_2564
10932
SUPERFAMILY--SSF52058
no
0.85
4
mRNA
_269
8637
BLAST nitrogen assimilation transcription factor [Rhodo...
no
0.85
5
mRNA
_6670
15038
K03676 grxC, GLRX, GLRX2 glutaredoxin 3
no
0.85
6
mRNA
_8116
16484
K00949 thiN, TPK1, THI80 thiamine pyrophosphokinase
no
0.82
7
mRNA
_5483
13851
KOG1339 Aspartyl protease
no
0.82
8
mRNA
_2865
11233
SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717
no
0.81
9
mRNA
_5501
13869
Hypothetical Protein
no
0.81
10
mRNA
_6758
15126
HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601
no
0.81
11
mRNA
_831
9199
K12366 ELMO1, CED12 engulfment and cell motility protein 1
no
0.81
12
mRNA
_7908
16276
K03783 punA, PNP purine-nucleoside phosphorylase
no
0.81
13
mRNA
_503
8871
Hypothetical Protein
no
0.80
14
mRNA
_996
9364
K19791 FET3_5 iron transport multicopper oxidase
no
0.80
15
mRNA
_2672
11040
K20032 ZDHHC13_17, HIP14 palmitoyltransferase ZDHHC13/17
no
0.80
16
mRNA
_5586
13954
HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874
no
0.80
17
mRNA
_539
8907
HMMPfam-Zinc finger, C2H2 type-PF00096,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157
no
0.79
18
mRNA
_2450
10818
KOG3037 Cell membrane glycoprotein
no
0.79
19
mRNA
_3456
11824
HMMPfam-Family of unknown function (DUF500)-PF04366
no
0.79
20
mRNA
_4744
13112
HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994
no
0.79