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Cofit
Protein
Homologs
Top cofit genes for mRNA_3463 from
Rhodosporidium toruloides IFO0880
11831
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_7390
15758
HMMPfam-Ubiquinol-cytochrome C reductase hinge protein-PF02320,SUPERFAMILY--SSF81531
no
0.82
2
mRNA
_5634
14002
K00750 GYG1, GYG2 glycogenin
no
0.81
3
mRNA
_305
8673
HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648
no
0.79
4
mRNA
_3481
11849
K01752 E4.3.1.17, sdaA, sdaB, tdcG L-serine dehydratase
no
0.78
5
mRNA
_4625
12993
K09660 MPDU1 mannose-P-dolichol utilization defect 1
no
0.77
6
mRNA
_4226
12594
K00700 GBE1, glgB 1,4-alpha-glucan branching enzyme
no
0.77
7
mRNA
_6199
14567
HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112
no
0.76
8
mRNA
_1468
9836
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701
no
0.75
9
mRNA
_62
8430
HMMPfam-HPP family-PF04982
no
0.75
10
mRNA
_7625
15993
HMMPfam-Hypoxia induced protein conserved region-PF04588,ProSiteProfiles-HIG1 domain profile.-PS51503
no
0.75
11
mRNA
_4374
12742
K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase
no
0.75
12
mRNA
_3079
11447
HMMPfam-DNA polymerase Ligase (LigD)-PF13298
no
0.74
13
mRNA
_1228
9596
K00693 GYS glycogen synthase
no
0.74
14
mRNA
_154
8522
Hypothetical Protein
no
0.73
15
mRNA
_2835
11203
K00022 HADH 3-hydroxyacyl-CoA dehydrogenase
no
0.73
16
mRNA
_7551
15919
KOG1032 Uncharacterized conserved protein, contains GRAM domain
no
0.73
17
mRNA
_3419
11787
K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase
no
0.72
18
mRNA
_5776
14144
HMMPfam-Phosphatidylinositol-specific phospholipase C, X domain-PF00388,ProSiteProfiles-Phosphatidylinositol-specific phospholipase X-box domain profile.-PS50007,SUPERFAMILY--SSF51695
no
0.71
19
mRNA
_6441
14809
K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit
no
0.70
20
mRNA
_4587
12955
HMMPfam-Complex1_LYR-like-PF13232
no
0.70