Top cofit genes for mRNA_3466 from Rhodosporidium toruloides IFO0880

11834: HMMPfam-Sds3-like-PF08598

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6804 15172 HMMPfam-CFEM domain-PF05730 no 0.76
2 mRNA_6461 14829 Hypothetical Protein no 0.73
3 mRNA_4275 12643 HMMPfam-RhoGEF domain-PF00621,ProSiteProfiles-Dbl homology (DH) domain profile.-PS50010,SUPERFAMILY--SSF48065 no 0.72
4 mRNA_4646 13014 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383 no 0.72
5 mRNA_890 9258 HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065 no 0.72
6 mRNA_8335 16703 HMMPfam-Shwachman-Bodian-Diamond syndrome (SBDS) protein-PF01172,SUPERFAMILY--SSF89895 no 0.70
7 mRNA_8161 16529 BLAST Actin cytoskeleton-regulatory complex protein pan1 [R... no 0.70
8 mRNA_6401 14769 HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112 no 0.69
9 mRNA_3107 11475 K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2 no 0.69
10 mRNA_6491 14859 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins no 0.69
11 mRNA_2185 10553 HMMPfam-Copper fist DNA binding domain-PF00649,PRINTS-Copper fist domain signature-PR00617,ProSiteProfiles-Copper-fist DNA-binding domain profile.-PS50073,SMART-Copper-Fist-SM00412,SMART--SM01090,SUPERFAMILY--SSF57879 no 0.68
12 mRNA_3437 11805 K03033 PSMD3, RPN3 26S proteasome regulatory subunit N3 no 0.68
13 mRNA_5454 13822 KOG2673 Uncharacterized conserved protein, contains PSP domain no 0.67
14 mRNA_2085 10453 BLAST nucleotide-diphospho-sugar transferase [Sanghuangporu... no 0.66
15 mRNA_1102 9470 K03327 TC.MATE, SLC47A, norM, mdtK, dinF multidrug resistance protein, MATE family no 0.66
16 mRNA_2894 11262 SUPERFAMILY--SSF52047 no 0.65
17 mRNA_7162 15530 ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103 no 0.65
18 mRNA_5341 13709 KOG0692 Pentafunctional AROM protein no 0.64
19 mRNA_6296 14664 Hypothetical Protein no 0.64
20 mRNA_8334 16702 BLAST mtf1_muccl ame full transcription factor mtf1 [Licht... no 0.64