Top cofit genes for mRNA_3527 from Rhodosporidium toruloides IFO0880

11895: K08658 RCE1, FACE2 prenyl protein peptidase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_5609	13977	HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058	no	0.85
2	mRNA_1197	9565	KOG2385 Uncharacterized conserved protein	no	0.79
3	mRNA_1620	9988	Hypothetical Protein	no	0.77
4	mRNA_4525	12893	KOG0143 Iron/ascorbate family oxidoreductases	no	0.77
5	mRNA_1742	10110	SUPERFAMILY--SSF48097	no	0.76
6	mRNA_2352	10720	K02903 RP-L28e, RPL28 large subunit ribosomal protein L28e	no	0.75
7	mRNA_2809	11177	K08596 SENP7 sentrin-specific protease 7	no	0.75
8	mRNA_3613	11981	K09518 DNAJB12 DnaJ homolog subfamily B member 12	no	0.74
9	mRNA_4481	12849	Hypothetical Protein	no	0.74
10	mRNA_389	8757	HMMPfam-Vacuolar sorting protein 9 (VPS9) domain-PF02204,ProSiteProfiles-VPS9 domain profile.-PS51205,SUPERFAMILY--SSF109993	no	0.74
11	mRNA_6443	14811	K10427 DCTN5 dynactin 5	no	0.73
12	mRNA_1255	9623	KOG1808 AAA ATPase containing von Willebrand factor type A (vWA) domain	no	0.73
13	mRNA_2552	10920	Hypothetical Protein	no	0.72
14	mRNA_1402	9770	K06654 PHO80 phosphate system cyclin PHO80	no	0.72
15	mRNA_5141	13509	K12198 CHMP5, VPS60 charged multivesicular body protein 5	no	0.72
16	mRNA_251	8619	HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021	no	0.71
17	mRNA_1338	9706	SUPERFAMILY--SSF52047	no	0.71
18	mRNA_3280	11648	Hypothetical Protein	no	0.71
19	mRNA_1722	10090	KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily	no	0.70
20	mRNA_6484	14852	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.70