Top cofit genes for mRNA_3558 from Rhodosporidium toruloides IFO0880

11926: K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_1529	9897	K12605 CNOT2, NOT2 CCR4-NOT transcription complex subunit 2	no	0.85
2	mRNA_3946	12314	K06176 truD, PUS7 tRNA pseudouridine13 synthase	no	0.83
3	mRNA_2217	10585	KOG2199 Signal transducing adaptor protein STAM/STAM2	no	0.81
4	mRNA_3271	11639	K07126 K07126 uncharacterized protein	no	0.79
5	mRNA_5338	13706	K00891 E2.7.1.71, aroK, aroL shikimate kinase	no	0.78
6	mRNA_2418	10786	HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445	no	0.78
7	mRNA_5483	13851	KOG1339 Aspartyl protease	no	0.78
8	mRNA_7286	15654	K17508 PTC7, PPTC7 protein phosphatase PTC7	no	0.76
9	mRNA_4240	12608	KOG1700 Regulatory protein MLP and related LIM proteins	no	0.76
10	mRNA_7142	15510	HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967	no	0.76
11	mRNA_2762	11130	BLAST Protein pof8 [Termitomyces sp. J132]	no	0.76
12	mRNA_1680	10048	BLAST cyclin-like F-box domain containing protein [Rhod...	no	0.76
13	mRNA_723	9091	K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase	no	0.75
14	mRNA_2865	11233	SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717	no	0.75
15	mRNA_2907	11275	HMMPfam-FAD dependent oxidoreductase-PF01266,SUPERFAMILY--SSF51971	no	0.75
16	mRNA_2343	10711	HMMPfam-GPR1/FUN34/yaaH family-PF01184	no	0.75
17	mRNA_1403	9771	K08190 SLC16A14 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 14	no	0.75
18	mRNA_4705	13073	K06065 NCOR2, SMRT nuclear receptor co-repressor 2	no	0.75
19	mRNA_5107	13475	K03130 TAF5 transcription initiation factor TFIID subunit 5	no	0.74
20	mRNA_8116	16484	K00949 thiN, TPK1, THI80 thiamine pyrophosphokinase	no	0.74