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Cofit
Protein
Homologs
Top cofit genes for mRNA_3608 from
Rhodosporidium toruloides IFO0880
11976
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_5069
13437
KOG2317 Putative translation initiation inhibitor UK114/IBM1
no
0.78
2
mRNA
_6288
14656
KOG0876 Manganese superoxide dismutase
no
0.77
3
mRNA
_7266
15634
Hypothetical Protein
no
0.76
4
mRNA
_58
8426
HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296
no
0.75
5
mRNA
_6529
14897
K03626 EGD2, NACA nascent polypeptide-associated complex subunit alpha
no
0.75
6
mRNA
_1991
10359
K03457 TC.NCS1 nucleobase-cation symporter-1, NCS1 family
no
0.74
7
mRNA
_731
9099
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.73
8
mRNA
_704
9072
Hypothetical Protein
no
0.73
9
mRNA
_3628
11996
K10849 ERCC1 DNA excision repair protein ERCC-1
no
0.73
10
mRNA
_4062
12430
HMMPfam-Protein of unknown function (DUF1115)-PF06544
no
0.72
11
mRNA
_4776
13144
Hypothetical Protein
no
0.72
12
mRNA
_4377
12745
Hypothetical Protein
no
0.70
13
mRNA
_8394
16762
KOG3680 Uncharacterized conserved protein
no
0.70
14
mRNA
_1134
9502
K10685 UBLE1B, SAE2, UBA2 ubiquitin-like 1-activating enzyme E1 B
no
0.69
15
mRNA
_4819
13187
Hypothetical Protein
no
0.68
16
mRNA
_3285
11653
KOG2069 Golgi transport complex subunit
no
0.68
17
mRNA
_3462
11830
K17978 NUM1 nuclear migration protein NUM1
no
0.68
18
mRNA
_4365
12733
HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920
no
0.68
19
mRNA
_5164
13532
HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281
no
0.67
20
mRNA
_664
9032
HMMPfam-2OG-Fe(II) oxygenase superfamily-PF13532,SUPERFAMILY--SSF51197
no
0.67