Top cofit genes for mRNA_3649 from Rhodosporidium toruloides IFO0880

12017: HMMPfam-Protein of unknown function, DUF604-PF04646

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_5462	13830	HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321	no	0.82
2	mRNA_4575	12943	HMMPfam-ICE2-PF08426	no	0.81
3	mRNA_5774	14142	K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126	no	0.78
4	mRNA_6586	14954	SUPERFAMILY--SSF55729	no	0.78
5	mRNA_4585	12953	SUPERFAMILY--SSF103473	no	0.78
6	mRNA_4872	13240	Hypothetical Protein	no	0.77
7	mRNA_4131	12499	KOG3783 Uncharacterized conserved protein	no	0.77
8	mRNA_8071	16439	Hypothetical Protein	no	0.77
9	mRNA_110	8478	KOG3399 Predicted Yippee-type zinc-binding protein	no	0.77
10	mRNA_4877	13245	KOG2533 Permease of the major facilitator superfamily	no	0.77
11	mRNA_1126	9494	K15334 NCL1, TRM4 multisite-specific tRNA-(cytosine-C5)-methyltransferase	no	0.76
12	mRNA_581	8949	Interpro ERCC4 domain 0	no	0.76
13	mRNA_6177	14545	K00868 pdxK, pdxY pyridoxine kinase	no	0.75
14	mRNA_6311	14679	K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7	no	0.75
15	mRNA_2778	11146	K15264 NSUN5, WBSCR20 putative methyltransferase	no	0.74
16	mRNA_2202	10570	K00365 uaZ urate oxidase	no	0.74
17	mRNA_6540	14908	K00838 ARO8 aromatic amino acid aminotransferase I	no	0.73
18	mRNA_3841	12209	K13431 SRPR signal recognition particle receptor subunit alpha	no	0.73
19	mRNA_3087	11455	HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489	no	0.72
20	mRNA_5212	13580	K00624 E2.3.1.7 carnitine O-acetyltransferase	no	0.72