Top cofit genes for mRNA_3792 from Rhodosporidium toruloides IFO0880

12160: K12811 DDX46, PRP5 ATP-dependent RNA helicase DDX46/PRP5

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_2040	10408	K11729 ACAD10 acyl-CoA dehydrogenase family member 10	no	0.87
2	mRNA_5877	14245	K00624 E2.3.1.7 carnitine O-acetyltransferase	no	0.86
3	mRNA_299	8667	ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199	no	0.86
4	mRNA_6437	14805	K07511 ECHS1 enoyl-CoA hydratase	no	0.85
5	mRNA_5031	13399	HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785	no	0.84
6	mRNA_707	9075	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.83
7	mRNA_5654	14022	K01637 E4.1.3.1, aceA isocitrate lyase	no	0.83
8	mRNA_1468	9836	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701	no	0.83
9	mRNA_4175	12543	K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6	no	0.83
10	mRNA_568	8936	K14454 GOT1 aspartate aminotransferase, cytoplasmic	no	0.82
11	mRNA_2408	10776	K07975 K07975 Rho family, other	no	0.82
12	mRNA_3170	11538	Hypothetical Protein	no	0.81
13	mRNA_6199	14567	HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112	no	0.80
14	mRNA_4484	12852	KOG2588 Predicted DNA-binding protein	no	0.80
15	mRNA_5702	14070	K09478 ACADSB short/branched chain acyl-CoA dehydrogenase	no	0.79
16	mRNA_4374	12742	K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase	no	0.79
17	mRNA_2763	11131	Hypothetical Protein	no	0.79
18	mRNA_7137	15505	KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein)	no	0.79
19	mRNA_2949	11317	K02267 COX6B cytochrome c oxidase subunit 6b	no	0.79
20	mRNA_305	8673	HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648	no	0.79