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Cofit
Protein
Homologs
Top cofit genes for mRNA_3813 from
Rhodosporidium toruloides IFO0880
12181
:
BLAST zinc finger, C3HC4 type (RING finger) protein [Rhizoc...
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1351
9719
Hypothetical Protein
no
0.78
2
mRNA
_5507
13875
KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase
no
0.77
3
mRNA
_8081
16449
K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase
no
0.77
4
mRNA
_5374
13742
KOG0001 Ubiquitin and ubiquitin-like proteins
no
0.76
5
mRNA
_5129
13497
Hypothetical Protein
no
0.76
6
mRNA
_8423
16791
SUPERFAMILY--SSF52047
no
0.74
7
mRNA
_4902
13270
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.73
8
mRNA
_2291
10659
HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300
no
0.73
9
mRNA
_6976
15344
K14002 SCJ1 DnaJ-related protein SCJ1
no
0.73
10
mRNA
_6358
14726
KOG1674 Cyclin
no
0.72
11
mRNA
_7392
15760
Hypothetical Protein
no
0.72
12
mRNA
_2582
10950
HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034
no
0.72
13
mRNA
_8072
16440
K14684 SLC25A23S solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
no
0.72
14
mRNA
_1393
9761
Hypothetical Protein
no
0.72
15
mRNA
_5489
13857
KOG1263 Multicopper oxidases
no
0.71
16
mRNA
_8289
16657
KOG1601 GATA-4/5/6 transcription factors
no
0.71
17
mRNA
_407
8775
Hypothetical Protein
no
0.70
18
mRNA
_2647
11015
Hypothetical Protein
no
0.70
19
mRNA
_3557
11925
K01634 SGPL1, DPL1 sphinganine-1-phosphate aldolase
no
0.70
20
mRNA
_7893
16261
KOG0928 Pattern-formation protein/guanine nucleotide exchange factor
no
0.70