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Gene
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Cofit
Protein
Homologs
Top cofit genes for mRNA_3831 from
Rhodosporidium toruloides IFO0880
12199
:
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_420
8788
K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase
no
0.82
2
mRNA
_3749
12117
HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850
no
0.81
3
mRNA
_746
9114
KOG0143 Iron/ascorbate family oxidoreductases
no
0.78
4
mRNA
_986
9354
K03781 katE, CAT, catB, srpA catalase
no
0.78
5
mRNA
_6356
14724
K01477 alc, ALLC allantoicase
no
0.77
6
mRNA
_1740
10108
K20828 ZNF143_76, STAF zinc finger protein 143/76
no
0.76
7
mRNA
_396
8764
K07478 ycaJ putative ATPase
no
0.75
8
mRNA
_7198
15566
Hypothetical Protein
no
0.75
9
mRNA
_6455
14823
KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins
no
0.75
10
mRNA
_3909
12277
K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1
no
0.75
11
mRNA
_1596
9964
K14557 UTP6 U3 small nucleolar RNA-associated protein 6
no
0.75
12
mRNA
_3628
11996
K10849 ERCC1 DNA excision repair protein ERCC-1
no
0.74
13
mRNA
_2409
10777
Hypothetical Protein
no
0.73
14
mRNA
_1281
9649
HMMPfam-Peptidase M50B-like-PF13398
no
0.73
15
mRNA
_6728
15096
K14309 NUP93, NIC96 nuclear pore complex protein Nup93
no
0.73
16
mRNA
_7893
16261
KOG0928 Pattern-formation protein/guanine nucleotide exchange factor
no
0.73
17
mRNA
_786
9154
Hypothetical Protein
no
0.72
18
mRNA
_6945
15313
SUPERFAMILY--SSF52047
no
0.72
19
mRNA
_5807
14175
HMMPfam-Protein of unknown function (DUF2638)-PF10937
no
0.72
20
mRNA
_4910
13278
K14555 UTP13, TBL3 U3 small nucleolar RNA-associated protein 13
no
0.72