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Cofit
Protein
Homologs
Top cofit genes for mRNA_3865 from
Rhodosporidium toruloides IFO0880
12233
:
HMMPfam-DASH complex subunit Spc34-PF08657
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_6728
15096
K14309 NUP93, NIC96 nuclear pore complex protein Nup93
no
0.81
2
mRNA
_6574
14942
K18258 CRYM thiomorpholine-carboxylate dehydrogenase
no
0.79
3
mRNA
_420
8788
K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase
no
0.76
4
mRNA
_1486
9854
K11085 msbA ATP-binding cassette, subfamily B, bacterial MsbA
no
0.76
5
mRNA
_2781
11149
K09506 DNAJA5 DnaJ homolog subfamily A member 5
no
0.75
6
mRNA
_123
8491
Hypothetical Protein
no
0.75
7
mRNA
_1300
9668
BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy...
no
0.75
8
mRNA
_786
9154
Hypothetical Protein
no
0.74
9
mRNA
_2646
11014
HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52058
no
0.74
10
mRNA
_1109
9477
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
no
0.73
11
mRNA
_5087
13455
K06890 K06890 uncharacterized protein
no
0.73
12
mRNA
_3946
12314
K06176 truD, PUS7 tRNA pseudouridine13 synthase
no
0.73
13
mRNA
_5619
13987
K09885 AQPF aquaporin rerated protein, other eukaryote
no
0.73
14
mRNA
_6905
15273
K14300 NUP133 nuclear pore complex protein Nup133
no
0.72
15
mRNA
_7085
15453
HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689
no
0.72
16
mRNA
_128
8496
K11592 DICER1, DCR1 endoribonuclease Dicer
no
0.72
17
mRNA
_2175
10543
HMMPfam-Mus7/MMS22 family-PF09462
no
0.72
18
mRNA
_567
8935
ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257
no
0.72
19
mRNA
_3812
12180
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.72
20
mRNA
_2492
10860
HMMPfam-Rsm1-like-PF08600
no
0.72