Top cofit genes for mRNA_3867 from Rhodosporidium toruloides IFO0880

12235: KOG1812 Predicted E3 ubiquitin ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_4939	13307	HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928	no	0.71
2	mRNA_8359	16727	Hypothetical Protein	no	0.68
3	mRNA_3627	11995	SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126	no	0.68
4	mRNA_4591	12959	KOG0379 Kelch repeat-containing proteins	no	0.67
5	mRNA_4073	12441	KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily	no	0.66
6	mRNA_5549	13917	K00027 ME2, sfcA, maeA malate dehydrogenase (oxaloacetate-decarboxylating)	no	0.65
7	mRNA_1369	9737	HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF52833	no	0.65
8	mRNA_6473	14841	HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723	no	0.65
9	mRNA_187	8555	Hypothetical Protein	no	0.65
10	mRNA_7441	15809	K08884 K08884 serine/threonine protein kinase, bacterial	no	0.65
11	mRNA_1077	9445	BLAST expressed protein [Cryptococcus neoformans var. neofo...	no	0.64
12	mRNA_8241	16609	Hypothetical Protein	no	0.63
13	mRNA_7617	15985	Hypothetical Protein	no	0.63
14	mRNA_7518	15886	KOG2641 Predicted seven transmembrane receptor - rhodopsin family	no	0.63
15	mRNA_1477	9845	Hypothetical Protein	no	0.63
16	mRNA_6775	15143	K14784 CMS1 protein CMS1	no	0.62
17	mRNA_1198	9566	Hypothetical Protein	no	0.61
18	mRNA_5167	13535	Hypothetical Protein	no	0.61
19	mRNA_1211	9579	K15078 SLX1 structure-specific endonuclease subunit SLX1	no	0.61
20	mRNA_3734	12102	Interpro Protein HRI1	no	0.60