Top cofit genes for mRNA_3872 from Rhodosporidium toruloides IFO0880

12240: KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_1112	9480	Interpro Protein of unknown function (DUF3602) Protein of unknown function (DUF3602) 0	no	0.82
2	mRNA_2908	11276	KOG3098 Uncharacterized conserved protein	no	0.80
3	mRNA_6122	14490	SUPERFAMILY--SSF53098	no	0.80
4	mRNA_2217	10585	KOG2199 Signal transducing adaptor protein STAM/STAM2	no	0.77
5	mRNA_5338	13706	K00891 E2.7.1.71, aroK, aroL shikimate kinase	no	0.74
6	mRNA_2587	10955	K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1	no	0.73
7	mRNA_7172	15540	K01408 IDE, ide insulysin	no	0.73
8	mRNA_3904	12272	KOG1176 Acyl-CoA synthetase	no	0.72
9	mRNA_3675	12043	K11251 H2A histone H2A	no	0.72
10	mRNA_1430	9798	KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1	no	0.72
11	mRNA_4174	12542	KOG4305 RhoGEF GTPase	no	0.71
12	mRNA_3891	12259	K07889 RAB5C Ras-related protein Rab-5C	no	0.71
13	mRNA_4270	12638	Hypothetical Protein	no	0.71
14	mRNA_3558	11926	K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10	no	0.71
15	mRNA_5646	14014	K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase	no	0.70
16	mRNA_5918	14286	K11498 CENPE centromeric protein E	no	0.70
17	mRNA_833	9201	HMMPfam-Homeobox domain-PF00046,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689	no	0.70
18	mRNA_3967	12335	KOG1972 Uncharacterized conserved protein	no	0.70
19	mRNA_5383	13751	Hypothetical Protein	no	0.69
20	mRNA_5586	13954	HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874	no	0.69