Top cofit genes for mRNA_3889 from Rhodosporidium toruloides IFO0880

12257: K00587 ICMT, STE14 protein-S-isoprenylcysteine O-methyltransferase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_6951	15319	ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065	no	0.76
2	mRNA_8393	16761	K12385 NPC1 Niemann-Pick C1 protein	no	0.75
3	mRNA_2523	10891	Hypothetical Protein	no	0.75
4	mRNA_7103	15471	Hypothetical Protein	no	0.75
5	mRNA_4519	12887	Hypothetical Protein	no	0.74
6	mRNA_2467	10835	Hypothetical Protein	no	0.73
7	mRNA_4141	12509	Hypothetical Protein	no	0.73
8	mRNA_6180	14548	KOG0218 Mismatch repair MSH3	no	0.73
9	mRNA_924	9292	KOG0798 Uncharacterized conserved protein	no	0.72
10	mRNA_7058	15426	KOG0206 P-type ATPase	no	0.72
11	mRNA_2226	10594	SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717	no	0.71
12	mRNA_4174	12542	KOG4305 RhoGEF GTPase	no	0.71
13	mRNA_3742	12110	SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126	no	0.71
14	mRNA_2343	10711	HMMPfam-GPR1/FUN34/yaaH family-PF01184	no	0.71
15	mRNA_4462	12830	Hypothetical Protein	no	0.71
16	mRNA_1395	9763	K07756 IP6K, IHPK inositol-hexakisphosphate 5-kinase	no	0.70
17	mRNA_5206	13574	HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236	no	0.70
18	mRNA_8369	16737	HMMPfam-Transient receptor potential (TRP) ion channel-PF06011	no	0.70
19	mRNA_5905	14273	KOG1947 Leucine rich repeat proteins, some proteins contain F-box	no	0.69
20	mRNA_1453	9821	HMMPfam-G-patch domain-PF01585,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-glycine rich nucleic binding domain-SM00443	no	0.69