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Cofit
Protein
Homologs
Top cofit genes for mRNA_3903 from
Rhodosporidium toruloides IFO0880
12271
:
K01273 DPEP membrane dipeptidase
SEED: putative dipeptidase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_1442
9810
K03549 kup KUP system potassium uptake protein
no
0.83
2
mRNA
_1746
10114
KOG2897 DNA-binding protein YL1 and related proteins
no
0.83
3
mRNA
_5827
14195
K04518 pheA2 prephenate dehydratase
no
0.81
4
mRNA
_3623
11991
HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.78
5
mRNA
_6325
14693
Hypothetical Protein
no
0.77
6
mRNA
_3650
12018
Hypothetical Protein
no
0.77
7
mRNA
_4036
12404
Hypothetical Protein
no
0.76
8
mRNA
_7907
16275
K14951 ATP13A3_4_5 cation-transporting ATPase 13A3/4/5
no
0.76
9
mRNA
_5105
13473
HMMPfam-Frequency clock protein-PF09421
no
0.76
10
mRNA
_6699
15067
HMMPfam-Peptidase family M20/M25/M40-PF01546,HMMPfam-Peptidase dimerisation domain-PF07687,PIRSF--PIRSF037226,SUPERFAMILY--SSF53187,SUPERFAMILY--SSF55031,TIGRFAM-amidohydrolases amidohydrolase-TIGR01891
no
0.76
11
mRNA
_1802
10170
K05546 GANAB alpha 1,3-glucosidase
no
0.76
12
mRNA
_2670
11038
SUPERFAMILY--SSF52058
no
0.76
13
mRNA
_5046
13414
HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112
no
0.76
14
mRNA
_6139
14507
Hypothetical Protein
no
0.75
15
mRNA
_927
9295
KOG1611 Predicted short chain-type dehydrogenase
no
0.75
16
mRNA
_4527
12895
SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735
no
0.75
17
mRNA
_3939
12307
K13954 yiaY alcohol dehydrogenase
no
0.74
18
mRNA
_2005
10373
K08286 E2.7.11.- protein-serine/threonine kinase
no
0.74
19
mRNA
_1797
10165
KOG2641 Predicted seven transmembrane receptor - rhodopsin family
no
0.73
20
mRNA
_3407
11775
KOG0498 K+-channel ERG and related proteins, contain PAS/PAC sensor domain
no
0.73