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Cofit
Protein
Homologs
Top cofit genes for mRNA_4059 from
Rhodosporidium toruloides IFO0880
12427
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_4505
12873
K18172 CMC2 COX assembly mitochondrial protein 2
no
0.72
2
mRNA
_6798
15166
Hypothetical Protein
no
0.70
3
mRNA
_7250
15618
BLAST ClpP/crotonase [Saitoella complicata NRRL Y-17804]
no
0.67
4
mRNA
_3980
12348
KOG1196 Predicted NAD-dependent oxidoreductase
no
0.66
5
mRNA
_2542
10910
Hypothetical Protein
no
0.66
6
mRNA
_7793
16161
KOG2533 Permease of the major facilitator superfamily
no
0.66
7
mRNA
_7168
15536
HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978
no
0.62
8
mRNA
_6624
14992
Hypothetical Protein
no
0.62
9
mRNA
_2836
11204
HMMPfam-Putative zinc finger motif, C2HC5-type-PF06221
no
0.61
10
mRNA
_2140
10508
HMMPfam-F-box domain-PF00646,HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF48350,SUPERFAMILY--SSF81383
no
0.59
11
mRNA
_4926
13294
ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013
no
0.59
12
mRNA
_4193
12561
Hypothetical Protein
no
0.59
13
mRNA
_6646
15014
K14647 vpr minor extracellular serine protease Vpr
no
0.59
14
mRNA
_337
8705
HMMPfam-Glycosyl hydrolases family 17-PF00332,SUPERFAMILY--SSF51445
no
0.59
15
mRNA
_1968
10336
HMMPfam-Membrane bound O-acyl transferase family-PF13813
no
0.58
16
mRNA
_2019
10387
K07088 K07088 uncharacterized protein
no
0.58
17
mRNA
_2134
10502
K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5
no
0.58
18
mRNA
_3804
12172
Hypothetical Protein
no
0.57
19
mRNA
_1954
10322
Hypothetical Protein
no
0.57
20
mRNA
_1928
10296
Hypothetical Protein
no
0.56