Top cofit genes for mRNA_4063 from Rhodosporidium toruloides IFO0880

12431: K10777 LIG4, DNL4 DNA ligase 4

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_6484	14852	HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701	no	0.87
2	mRNA_7280	15648	Hypothetical Protein	no	0.83
3	mRNA_3596	11964	HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197	no	0.81
4	mRNA_7852	16220	Hypothetical Protein	no	0.81
5	mRNA_1709	10077	K16302 CNNM metal transporter CNNM	no	0.80
6	mRNA_824	9192	Hypothetical Protein	no	0.78
7	mRNA_4734	13102	Hypothetical Protein	no	0.78
8	mRNA_2972	11340	K03850 ALG10 alpha-1,2-glucosyltransferase	no	0.78
9	mRNA_691	9059	BLAST gliotoxin biosynthesis protein GliK [Marssonina b...	no	0.78
10	mRNA_7356	15724	HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232	no	0.78
11	mRNA_2179	10547	K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures	no	0.77
12	mRNA_3025	11393	K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1	no	0.75
13	mRNA_7858	16226	K11673 ACTR8, ARP8, INO80N actin-related protein 8	no	0.75
14	mRNA_2093	10461	K10967 KTR1_3 alpha 1,2-mannosyltransferase	no	0.75
15	mRNA_3588	11956	KOG0254 Predicted transporter (major facilitator superfamily)	no	0.75
16	mRNA_2556	10924	Hypothetical Protein	no	0.74
17	mRNA_4747	13115	SUPERFAMILY--SSF52047	no	0.74
18	mRNA_5837	14205	Hypothetical Protein	no	0.74
19	mRNA_5141	13509	K12198 CHMP5, VPS60 charged multivesicular body protein 5	no	0.74
20	mRNA_251	8619	HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021	no	0.73