Top cofit genes for mRNA_4064 from Rhodosporidium toruloides IFO0880

12432: HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_7159	15527	HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928	no	0.76
2	mRNA_5646	14014	K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase	no	0.75
3	mRNA_5011	13379	BLAST transmembrane protein, putative [Rhizoctonia solani A...	no	0.74
4	mRNA_6256	14624	Hypothetical Protein	no	0.73
5	mRNA_503	8871	Hypothetical Protein	no	0.73
6	mRNA_1593	9961	KOG4366 Predicted thioesterase	no	0.72
7	mRNA_7137	15505	KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein)	no	0.72
8	mRNA_1973	10341	KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton	no	0.72
9	mRNA_1826	10194	Hypothetical Protein	no	0.72
10	mRNA_1797	10165	KOG2641 Predicted seven transmembrane receptor - rhodopsin family	no	0.72
11	mRNA_1717	10085	HMMPfam-Per1-like-PF04080	no	0.71
12	mRNA_8338	16706	Hypothetical Protein	no	0.71
13	mRNA_1150	9518	Hypothetical Protein	no	0.70
14	mRNA_5031	13399	HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785	no	0.70
15	mRNA_6868	15236	Hypothetical Protein	no	0.70
16	mRNA_4689	13057	Hypothetical Protein	no	0.69
17	mRNA_2473	10841	K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP)	no	0.69
18	mRNA_7416	15784	Hypothetical Protein	no	0.69
19	mRNA_7025	15393	K13122 FRG1 protein FRG1	no	0.69
20	mRNA_4203	12571	K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2	no	0.69