Top cofit genes for mRNA_4092 from Rhodosporidium toruloides IFO0880

12460: KOG0941 E3 ubiquitin protein ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_3909	12277	K10638 UHRF1, NP95 E3 ubiquitin-protein ligase UHRF1	no	0.83
2	mRNA_6180	14548	KOG0218 Mismatch repair MSH3	no	0.79
3	mRNA_6725	15093	K07575 K07575 PUA domain protein	no	0.78
4	mRNA_1063	9431	BLAST DNA replication ATP-dependent helicase Dna2 [Rhod...	no	0.77
5	mRNA_746	9114	KOG0143 Iron/ascorbate family oxidoreductases	no	0.77
6	mRNA_1721	10089	K11483 HOS2 histone deacetylase HOS2	no	0.76
7	mRNA_7195	15563	KOG0519 Sensory transduction histidine kinase	no	0.76
8	mRNA_4705	13073	K06065 NCOR2, SMRT nuclear receptor co-repressor 2	no	0.76
9	mRNA_5826	14194	SUPERFAMILY--SSF52047	no	0.76
10	mRNA_5061	13429	K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4	no	0.76
11	mRNA_3295	11663	K14324 SAP18 histone deacetylase complex subunit SAP18	no	0.75
12	mRNA_1740	10108	K20828 ZNF143_76, STAF zinc finger protein 143/76	no	0.74
13	mRNA_1596	9964	K14557 UTP6 U3 small nucleolar RNA-associated protein 6	no	0.74
14	mRNA_4415	12783	HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383	no	0.74
15	mRNA_8137	16505	K00586 DPH5 diphthine methyl ester synthase	no	0.73
16	mRNA_4592	12960	K11655 BAZ1A, ACF1 bromodomain adjacent to zinc finger domain protein 1A	no	0.72
17	mRNA_5536	13904	Hypothetical Protein	no	0.72
18	mRNA_5863	14231	K09281 K09281 copper-fist transcription factor	no	0.72
19	mRNA_2713	11081	BLAST Clp1-like protein, putative [Rhizoctonia solani AG-3 ...	no	0.72
20	mRNA_963	9331	K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	no	0.72