Top cofit genes for mRNA_4156 from Rhodosporidium toruloides IFO0880

12524: KOG1242 Protein containing adaptin N-terminal region

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_2865	11233	SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717	no	0.83
2	mRNA_5357	13725	HMMPfam-Methyltransferase domain-PF12847,SUPERFAMILY--SSF53335	no	0.81
3	mRNA_6670	15038	K03676 grxC, GLRX, GLRX2 glutaredoxin 3	no	0.80
4	mRNA_3170	11538	Hypothetical Protein	no	0.79
5	mRNA_2564	10932	SUPERFAMILY--SSF52058	no	0.79
6	mRNA_1267	9635	K00814 GPT, ALT alanine transaminase	no	0.78
7	mRNA_1430	9798	KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1	no	0.78
8	mRNA_5338	13706	K00891 E2.7.1.71, aroK, aroL shikimate kinase	no	0.76
9	mRNA_5031	13399	HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785	no	0.76
10	mRNA_8369	16737	HMMPfam-Transient receptor potential (TRP) ion channel-PF06011	no	0.76
11	mRNA_5483	13851	KOG1339 Aspartyl protease	no	0.76
12	mRNA_5058	13426	K07249 E1.2.1.36 retinal dehydrogenase	no	0.75
13	mRNA_2499	10867	BLAST secreted protein [Moniliophthora roreri MCA 2997]	no	0.75
14	mRNA_5702	14070	K09478 ACADSB short/branched chain acyl-CoA dehydrogenase	no	0.75
15	mRNA_1600	9968	K12178 COPS4, CSN4 COP9 signalosome complex subunit 4	no	0.75
16	mRNA_7286	15654	K17508 PTC7, PPTC7 protein phosphatase PTC7	no	0.75
17	mRNA_3814	12182	PRINTS-Proline rich extensin signature-PR01217	no	0.75
18	mRNA_549	8917	K12618 XRN1, SEP1, KEM1 5'-3' exoribonuclease 1	no	0.74
19	mRNA_7908	16276	K03783 punA, PNP purine-nucleoside phosphorylase	no	0.73
20	mRNA_8389	16757	Hypothetical Protein	no	0.73