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Cofit
Protein
Homologs
Top cofit genes for mRNA_4170 from
Rhodosporidium toruloides IFO0880
12538
:
KOG1256 Long-chain acyl-CoA synthetases (AMP-forming)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_7705
16073
Hypothetical Protein
no
0.85
2
mRNA
_3925
12293
Hypothetical Protein
no
0.84
3
mRNA
_4219
12587
HMMPfam-Protein phosphatase inhibitor 2 (IPP-2)-PF04979
no
0.83
4
mRNA
_2285
10653
SUPERFAMILY--SSF53300
no
0.80
5
mRNA
_6823
15191
BLAST TNFR/NGFR cysteine-rich region family protein [Rh...
no
0.80
6
mRNA
_2336
10704
KOG0254 Predicted transporter (major facilitator superfamily)
no
0.80
7
mRNA
_6033
14401
Hypothetical Protein
no
0.80
8
mRNA
_6276
14644
K12615 EDC3 enhancer of mRNA-decapping protein 3
no
0.80
9
mRNA
_1741
10109
HMMPfam-Calcipressin-PF04847
no
0.79
10
mRNA
_1102
9470
K03327 TC.MATE, SLC47A, norM, mdtK, dinF multidrug resistance protein, MATE family
no
0.77
11
mRNA
_6916
15284
SUPERFAMILY--SSF52833
no
0.77
12
mRNA
_5005
13373
K10956 SEC61A protein transport protein SEC61 subunit alpha
no
0.77
13
mRNA
_8471
16839
Hypothetical Protein
no
0.76
14
mRNA
_2576
10944
Hypothetical Protein
no
0.76
15
mRNA
_7607
15975
BLAST UPF0428 CXorf56-like protein, putative [Rhizoctonia s...
no
0.76
16
mRNA
_7671
16039
SUPERFAMILY--SSF56112
no
0.76
17
mRNA
_580
8948
Hypothetical Protein
no
0.76
18
mRNA
_5938
14306
Hypothetical Protein
no
0.76
19
mRNA
_2253
10621
HMMPfam-Staphylococcal nuclease homologue-PF00565,ProSiteProfiles-Thermonuclease domain profile.-PS50830,SMART-Staphylococcal nuclease homologues-SM00318,SUPERFAMILY--SSF50199
no
0.75
20
mRNA
_6837
15205
HMMPfam-DUF2407 ubiquitin-like domain-PF10302,HMMPfam-DUF2407 C-terminal domain-PF13373
no
0.75