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Cofit
Protein
Homologs
Top cofit genes for mRNA_4190 from
Rhodosporidium toruloides IFO0880
12558
:
Hypothetical Protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_3411
11779
SUPERFAMILY--SSF81296
no
0.87
2
mRNA
_5846
14214
K04508 TBL1 transducin (beta)-like 1
no
0.85
3
mRNA
_3504
11872
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.85
4
mRNA
_967
9335
HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452
no
0.83
5
mRNA
_6878
15246
Hypothetical Protein
no
0.82
6
mRNA
_1187
9555
Hypothetical Protein
no
0.81
7
mRNA
_440
8808
HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321
no
0.81
8
mRNA
_7009
15377
Hypothetical Protein
no
0.79
9
mRNA
_7679
16047
K12861 BCAS2 pre-mRNA-splicing factor SPF27
no
0.79
10
mRNA
_2055
10423
KOG2817 Predicted E3 ubiquitin ligase
no
0.78
11
mRNA
_7331
15699
KOG1666 V-SNARE
no
0.78
12
mRNA
_1044
9412
K07765 MBTPS2 S2P endopeptidase
no
0.77
13
mRNA
_7242
15610
K01265 map methionyl aminopeptidase
no
0.77
14
mRNA
_4503
12871
K12397 AP3B AP-3 complex subunit beta
no
0.76
15
mRNA
_3744
12112
KOG0955 PHD finger protein BR140/LIN-49
no
0.75
16
mRNA
_4452
12820
K13955 yogA zinc-binding alcohol dehydrogenase/oxidoreductase
no
0.75
17
mRNA
_1640
10008
KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.75
18
mRNA
_1163
9531
KOG1378 Purple acid phosphatase
no
0.75
19
mRNA
_1547
9915
K14402 CPSF2, CFT2 cleavage and polyadenylation specificity factor subunit 2
no
0.75
20
mRNA
_1395
9763
K07756 IP6K, IHPK inositol-hexakisphosphate 5-kinase
no
0.75