Top cofit genes for mRNA_4258 from Rhodosporidium toruloides IFO0880

12626: KOG4044 Mitochondrial associated endoribonuclease MAR1 (isochorismatase superfamily)
SEED: Isochorismatase (EC 3.3.2.1)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	mRNA_3497	11865	HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236	no	0.81
2	mRNA_5589	13957	HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371	no	0.80
3	mRNA_5441	13809	Hypothetical Protein	no	0.79
4	mRNA_316	8684	K18802 DUG3 glutamine amidotransferase	no	0.78
5	mRNA_4387	12755	HMMPfam-Ctf8-PF09696	no	0.78
6	mRNA_7701	16069	SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371	no	0.78
7	mRNA_5169	13537	Hypothetical Protein	no	0.77
8	mRNA_8457	16825	K02728 PSMA4 20S proteasome subunit alpha 3	no	0.77
9	mRNA_5664	14032	K01262 pepP Xaa-Pro aminopeptidase	no	0.76
10	mRNA_2224	10592	KOG2653 6-phosphogluconate dehydrogenase	no	0.76
11	mRNA_7372	15740	K03869 CUL3 cullin 3	no	0.75
12	mRNA_1300	9668	BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy...	no	0.75
13	mRNA_322	8690	Hypothetical Protein	no	0.75
14	mRNA_4766	13134	BLAST ribonuclease e [Moniliophthora roreri MCA 2997]	no	0.74
15	mRNA_6761	15129	K00944 AK3 nucleoside-triphosphate--adenylate kinase	no	0.74
16	mRNA_7827	16195	KOG4680 Uncharacterized conserved protein, contains ML domain	no	0.74
17	mRNA_5668	14036	K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	no	0.74
18	mRNA_4262	12630	KOG2688 Transcription-associated recombination protein - Thp1p	no	0.73
19	mRNA_5365	13733	K00107 ALO D-arabinono-1,4-lactone oxidase	no	0.73
20	mRNA_3883	12251	K01784 galE, GALE UDP-glucose 4-epimerase	no	0.73