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Cofit
Protein
Homologs
Top cofit genes for mRNA_4265 from
Rhodosporidium toruloides IFO0880
12633
:
BLAST lytic polysaccharide monooxygenase [Cenococcum geophi...
Rank
Hit
Name
Description
Conserved?
Cofitness
1
mRNA
_914
9282
K10903 HUS1 HUS1 checkpoint protein
no
0.71
2
mRNA
_5640
14008
BLAST putative acyl- dehydrogenase [Moniliophthora rore...
no
0.70
3
mRNA
_6690
15058
KOG4776 Uncharacterized conserved protein BCNT
no
0.69
4
mRNA
_733
9101
K13954 yiaY alcohol dehydrogenase
no
0.69
5
mRNA
_5717
14085
K20524 LSB5 LAS seventeen-binding protein 5
no
0.68
6
mRNA
_8077
16445
HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
no
0.67
7
mRNA
_3350
11718
KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily
no
0.67
8
mRNA
_5169
13537
Hypothetical Protein
no
0.67
9
mRNA
_7730
16098
Hypothetical Protein
no
0.66
10
mRNA
_8377
16745
HMMPfam-Fungal specific transcription factor domain-PF04082
no
0.65
11
mRNA
_6293
14661
K18467 VPS29 vacuolar protein sorting-associated protein 29
no
0.64
12
mRNA
_7411
15779
K02537 MAD2 mitotic spindle assembly checkpoint protein MAD2
no
0.63
13
mRNA
_4282
12650
Hypothetical Protein
no
0.63
14
mRNA
_4939
13307
HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928
no
0.63
15
mRNA
_7992
16360
HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232
no
0.62
16
mRNA
_8119
16487
Hypothetical Protein
no
0.62
17
mRNA
_2037
10405
Hypothetical Protein
no
0.62
18
mRNA
_5954
14322
HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665
no
0.62
19
mRNA
_7020
15388
K11446 KDM5, JARID1 histone demethylase JARID1
no
0.62
20
mRNA
_58
8426
HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296
no
0.62